NMDC Documentation
==================

.. toctree::
   :maxdepth: 2
   :caption: NMDC Overview:

   overview/nmdc_overview.rst

.. toctree::
   :maxdepth: 2
   :caption: Tutorials:
 
   Submitting to NMDC <./tutorials/submission_portal.md>
   Running the Workflows <./tutorials/run_workflows>
   Navigating the Data Portal <./tutorials/nav_data_portal>

.. toctree::
   :maxdepth: 2
   :caption: How-To Guides:

   Creating a Data Mgt. Plan <./howto_guides/data_plan.md>
   Submitting to NMDC <./howto_guides/submit2nmdc.md>
   Running the Workflows <./howto_guides/run_workflows.md>
   Navigating the Data Portal <./howto_guides/portal_guide.md>
   Using the NMDC API GUI <./howto_guides/api_gui.md>
   Downloading Data via Globus <./howto_guides/globus.md>

.. toctree::
   :maxdepth: 2
   :caption: Reference:

   NMDC Schema <https://w3id.org/nmdc/about>
   NMDC Workflows <https://nmdc-workflow-documentation.readthedocs.io/en/latest/chapters/overview.html>
   NMDC Data Portal <./reference/data_portal.md>

.. toctree::
   :maxdepth: 2
   :caption: Explanation:

   FAIR Data <./explanation/fair_data.md>
   IDEA <./explanation/idea.md>
   Community Conversations <./explanation/community_conversations.md>
   Publications <./explanation/publications.md>